Special

FBgn0264255 @ dm6

Biotype
protein_coding
Gene Symbol
para
Description
Coordinates
chrX:16455027-16533096:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
22.33
43.51
0
Alternative 3'ss
116
chrX:16527784-16527899
-
74.78
46.04
0
Alternative 3'ss
0
NA
-
19.81
95.15
0
Alternative 3'ss
24
chrX:16489854-16489877
-
80.19
95.15
0
Alternative 3'ss
0
NA
-
79.8
94.12
0
Alternative 3'ss
30
chrX:16483860-16483889
-
20.2
94.12
0
Alternative 3'ss
0
NA
-
77.18
96.15
0
Alternative 3'ss
75
chrX:16483034-16483108
-
22.82
96.15
0
Alternative 5'ss
0
NA
-
62.49
96.86
0
Alternative 5'ss
39
chrX:16486341-16486379
-
37.51
96.86
0
Alternative 5'ss
0
NA
-
22.26
67.36
0
Alternative 5'ss
3
chrX:16521623-16521625
-
77.74
67.36
0
Exon Skipping
163
chrX:16488987-16489149
-
7.3
28.24
0
Exon Skipping
163
chrX:16487883-16488045
-
87.72
41.82
0
Exon Skipping
123
chrX:16477449-16477571
-
95.48
27.53
0
Exon Skipping
63
chrX:16500507-16500569
-
56.36
61.36
0
Exon Skipping
33
chrX:16518805-16518837
-
69.57
95.95
0
Exon Skipping
129
chrX:16509576-16509704
-
95.76
38.71
0
Exon Skipping
123
chrX:16480680-16480802
-
4.57
23.55
0
Intron Retention
1208
chrX:16504299-16505506
-
19.46
67.04
0
Intron Retention
2569
chrX:16489878-16492446
-
11.37
39.11
0
Intron Retention
133
chrX:16486585-16486717
-
5.64
100
0
Intron Retention
644
chrX:16483034-16483677
-
35.06
79.17
0
Intron Retention
1126
chrX:16481500-16482625
-
44.18
88.07
0
Intron Retention
3754
chrX:16477572-16481325
-
40
91.52
0
Intron Retention
1698
chrX:16475751-16477448
-
32.39
88.51
0
Intron Retention
986
chrX:16474642-16475627
-
14.45
44.68
0
Intron Retention
619
chrX:16473828-16474446
-
26.18
44.18
0
Intron Retention
2097
chrX:16471485-16473581
-
25.98
80.61
0
Intron Retention
4414
chrX:16466800-16471213
-
43.05
93.33
0
Intron Retention
2785
chrX:16518838-16521622
-
24.13
73.85
0
Intron Retention
1702
chrX:16464793-16466494
-
27.27
66.72
0
Intron Retention
4620
chrX:16514185-16518804
-
17.02
46.7
0
Intron Retention
108
chrX:16513921-16514028
-
15.58
53.76
0
Intron Retention
4010
chrX:16509705-16513714
-
29.66
93.23
0
Intron Retention
3136
chrX:16506440-16509575
-
30.52
88.64
0
Intron Retention
100
chrX:16506248-16506347
-
17.45
68.46
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000007314 SCN4A 1-to-10
Human hg38 ENSG00000136546 SCN7A 1-to-10
Human hg38 ENSG00000144285 SCN1A 1-to-10
Human hg38 ENSG00000183873 SCN5A 1-to-10
Human hg38 ENSG00000196876 SCN8A 1-to-10
Human hg19 ENSG00000007314 SCN4A 1-to-10
Human hg19 ENSG00000136546 SCN7A 1-to-10
Human hg19 ENSG00000144285 SCN1A 1-to-10
Human hg19 ENSG00000183873 SCN5A 1-to-10
Human hg19 ENSG00000196876 SCN8A 1-to-10
Mouse mm10 ENSMUSG00000032511 Scn5a 1-to-10
Mouse mm10 ENSMUSG00000034533 Scn10a 1-to-10
Mouse mm10 ENSMUSG00000034810 Scn7a 1-to-10
Mouse mm10 ENSMUSG00000064329 Scn1a 1-to-10
Mouse mm10 ENSMUSG00000075316 Scn9a 1-to-10
Mouse mm9 ENSMUSG00000032511 Scn5a 1-to-10
Mouse mm9 ENSMUSG00000034533 Scn10a 1-to-10
Mouse mm9 ENSMUSG00000034810 Scn7a 1-to-10
Mouse mm9 ENSMUSG00000064329 Scn1a 1-to-10
Mouse mm9 ENSMUSG00000075316 Scn9a 1-to-10
Cow bosTau6 ENSBTAG00000004770 SCN4A 1-to-10
Cow bosTau6 ENSBTAG00000018520 SCN1A 1-to-10
Cow bosTau6 ENSBTAG00000019137 SCN7A 1-to-10
Cow bosTau6 ENSBTAG00000021339 SCN8A 1-to-10
Cow bosTau6 ENSBTAG00000046911 SCN10A 1-to-10
Chicken galGal4 ENSGALG00000006072 SCN10A 1-to-9
Chicken galGal4 ENSGALG00000006112 SCN5A 1-to-9
Chicken galGal4 ENSGALG00000010943 SCN1A 1-to-9
Chicken galGal4 ENSGALG00000011009 SCN2A 1-to-9
Chicken galGal4 ENSGALG00000027702 SCN11A 1-to-9
Chicken galGal3 ENSGALG00000006072 E1BXV5_CHICK 1-to-9
Chicken galGal3 ENSGALG00000006112 F1NDB7_CHICK 1-to-9
Chicken galGal3 ENSGALG00000010943 E1C4S3_CHICK 1-to-9
Chicken galGal3 ENSGALG00000011009 F1NN72_CHICK 1-to-9
Zebrafish danRer10 ENSDARG00000005775 scn8aa 1-to-8
Zebrafish danRer10 ENSDARG00000018032 scn8ab 1-to-8
Zebrafish danRer10 ENSDARG00000034588 scn4ab 1-to-8
Zebrafish danRer10 ENSDARG00000062744 scn1lab 1-to-8
Zebrafish danRer10 ENSDARG00000086819 scn1a 1-to-8