Special

ENSMUSG00000032511 @ mm10

Biotype
protein_coding
Gene Symbol
Scn5a
Description
sodium channel, voltage-gated, type V, alpha [Source:MGI Symbol;Acc:MGI:98251]
Coordinates
chr9:119483408-119579016:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
88.03
14.46
7
Alternative 3'ss
3
chr9:119516062-119516064
-
11.97
14.46
7
Exon Skipping
159
chr9:119515903-119516061
-
45.62
93.15
1
Exon Skipping
92
chr9:119543324-119543415
-
21.53
90.52
5
Exon Skipping
92
chr9:119543099-119543190
-
76.16
92.09
5
Exon Skipping
54
chr9:119493061-119493114
-
100
0
1
Intron Retention
520
chr9:119534035-119534554
-
8.71
35.8
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000183873 SCN5A 1-to-1
Human hg19 ENSG00000183873 SCN5A 1-to-1
Rat rn6 ENSRNOG00000015049 Scn5a 1-to-1
Cow bosTau6 ENSBTAG00000009155 SCN5A 1-to-1
Chicken galGal3 ENSGALG00000006112 F1NDB7_CHICK 1-to-1
Fruitfly dm6 FBgn0264255 para 10-to-1