Special

ENSBTAG00000021339 @ bosTau6

Biotype
protein_coding
Gene Symbol
SCN8A
Description
sodium channel, voltage gated, type VIII alpha subunit [Source:HGNC Symbol;Acc:HGNC:10596]
Coordinates
chr5:28211640-28331404:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
95.12
13.33
0
Alternative 5'ss
33
chr5:28270363-28270395
-
4.88
13.33
0
Exon Skipping
471
chr5:28237144-28237614
-
98.72
10.26
0
Exon Skipping
70
chr5:28229842-28229911
-
7.98
22.24
3
Exon Skipping
123
chr5:28229349-28229471
-
50.9
98.31
2
Exon Skipping
92
chr5:28297742-28297833
-
64.52
63.94
1
Exon Skipping
92
chr5:28297494-28297585
-
39.7
60.48
1
Intron Retention
11420
chr5:28286322-28297741
-
3.86
25
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196876 SCN8A 1-to-1
Human hg19 ENSG00000196876 SCN8A 1-to-1
Mouse mm10 ENSMUSG00000023033 Scn8a 1-to-1
Mouse mm9 ENSMUSG00000023033 Scn8a 1-to-1
Rat rn6 ENSRNOG00000005309 Scn8a 1-to-1
Chicken galGal4 ENSGALG00000006060 SCN8A 1-to-1
Chicken galGal3 ENSGALG00000006060 SCN8A 1-to-1
Zebrafish danRer10 ENSDARG00000005775 scn8aa 1-to-2
Zebrafish danRer10 ENSDARG00000018032 scn8ab 1-to-2
Fruitfly dm6 FBgn0264255 para 10-to-1