Special

ENSGALG00000006060 @ galGal4

Biotype
protein_coding
Gene Symbol
SCN8A
Description
sodium channel, voltage gated, type VIII alpha subunit [Source:HGNC Symbol;Acc:HGNC:10596]
Coordinates
chrLGE22C19W28_E50C23:48918-115740:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
123
chrLGE22C19W28_E50C23:84141-84263
-
65.99
100
2
Exon Skipping
92
chrLGE22C19W28_E50C23:104801-104892
-
50.48
93.76
1
Exon Skipping
92
chrLGE22C19W28_E50C23:104511-104602
-
44.36
91.27
1
Exon Skipping
90
chrLGE22C19W28_E50C23:107202-107291
-
80.07
98.57
0
Intron Retention
6783
chrLGE22C19W28_E50C23:108628-115410
-
9.76
29.17
0
Intron Retention
3288
chrLGE22C19W28_E50C23:80853-84140
-
14.02
25.85
0
Intron Retention
286
chrLGE22C19W28_E50C23:79801-80086
-
10.92
21.6
0
Intron Retention
4299
chrLGE22C19W28_E50C23:100502-104800
-
6.57
25.93
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196876 SCN8A 1-to-1
Human hg19 ENSG00000196876 SCN8A 1-to-1
Mouse mm10 ENSMUSG00000023033 Scn8a 1-to-1
Mouse mm9 ENSMUSG00000023033 Scn8a 1-to-1
Cow bosTau6 ENSBTAG00000021339 SCN8A 1-to-1
Zebrafish danRer10 ENSDARG00000005775 scn8aa 1-to-2
Zebrafish danRer10 ENSDARG00000018032 scn8ab 1-to-2