Special

ENSMUSG00000023033 @ mm9

Biotype
protein_coding
Gene Symbol
Scn8a
Description
sodium channel, voltage-gated, type VIII, alpha [Source:MGI Symbol;Acc:MGI:103169]
Coordinates
chr15:100785829-100876360:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
123
chr15:100854692-100854814
+
51.46
98.65
2
Exon Skipping
92
chr15:100789771-100789862
+
29.72
20.22
1
Exon Skipping
92
chr15:100790034-100790125
+
65.03
90.58
1
Intron Retention
5736
chr15:100848956-100854691
+
10.4
23.56
0
Intron Retention
5194
chr15:100854815-100860008
+
11.92
25.34
0
Intron Retention
2013
chr15:100788021-100790033
+
12.24
56.77
0
Intron Retention
9326
chr15:100790126-100799451
+
28.13
75.89
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196876 SCN8A 1-to-1
Human hg19 ENSG00000196876 SCN8A 1-to-1
Rat rn6 ENSRNOG00000005309 Scn8a 1-to-1
Cow bosTau6 ENSBTAG00000021339 SCN8A 1-to-1
Chicken galGal4 ENSGALG00000006060 SCN8A 1-to-1
Chicken galGal3 ENSGALG00000006060 SCN8A 1-to-1
Zebrafish danRer10 ENSDARG00000005775 scn8aa 1-to-2
Zebrafish danRer10 ENSDARG00000018032 scn8ab 1-to-2
Fruitfly dm6 FBgn0264255 para 10-to-1