Special

ENSDARG00000005775 @ danRer10

Biotype
protein_coding
Gene Symbol
scn8aa
Description
sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
Coordinates
chr23:27325085-27418884:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
78.87
71.26
0
Alternative 5'ss
33
chr23:27366566-27366598
-
21.13
71.26
0
Exon Skipping
114
chr23:27339672-27339785
-
20.24
100
0
Exon Skipping
87
chr23:27336766-27336852
-
17.53
74.96
3
Exon Skipping
123
chr23:27336143-27336265
-
68.1
95.69
2
Exon Skipping
92
chr23:27384255-27384346
-
48.66
97.3
1
Exon Skipping
92
chr23:27383949-27384040
-
54.78
96.54
1
Intron Retention
2808
chr23:27363791-27366598
-
10.92
21.65
0
Intron Retention
11288
chr23:27336266-27347553
-
10.9
40.01
0
Intron Retention
7906
chr23:27328237-27336142
-
20.02
43.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196876 SCN8A 2-to-1
Human hg19 ENSG00000196876 SCN8A 2-to-1
Mouse mm10 ENSMUSG00000023033 Scn8a 2-to-1
Mouse mm9 ENSMUSG00000023033 Scn8a 2-to-1
Rat rn6 ENSRNOG00000005309 Scn8a 2-to-1
Cow bosTau6 ENSBTAG00000021339 SCN8A 2-to-1
Chicken galGal4 ENSGALG00000006060 SCN8A 2-to-1
Chicken galGal3 ENSGALG00000006060 SCN8A 2-to-1
Fruitfly dm6 FBgn0264255 para 8-to-1