Special

ENSMUSG00000023033 @ mm10

Biotype
protein_coding
Gene Symbol
Scn8a
Description
sodium channel, voltage-gated, type VIII, alpha [Source:MGI Symbol;Acc:MGI:103169]
Coordinates
chr15:100869858-101045938:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
123
chr15:101024261-101024383
+
51.35
100
2
Exon Skipping
92
chr15:100959340-100959431
+
52.74
97.56
1
Exon Skipping
92
chr15:100959603-100959694
+
59.72
99.18
1
Exon Skipping
68
chr15:101023839-101023906
+
35.13
96.91
3
Intron Retention
5194
chr15:101024384-101029577
+
10.92
26.37
0
Intron Retention
2013
chr15:100957590-100959602
+
12.24
56.77
0
Intron Retention
9326
chr15:100959695-100969020
+
25.89
78.2
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196876 SCN8A 1-to-1
Human hg19 ENSG00000196876 SCN8A 1-to-1
Rat rn6 ENSRNOG00000005309 Scn8a 1-to-1
Cow bosTau6 ENSBTAG00000021339 SCN8A 1-to-1
Chicken galGal4 ENSGALG00000006060 SCN8A 1-to-1
Chicken galGal3 ENSGALG00000006060 SCN8A 1-to-1
Zebrafish danRer10 ENSDARG00000005775 scn8aa 1-to-2
Zebrafish danRer10 ENSDARG00000018032 scn8ab 1-to-2
Fruitfly dm6 FBgn0264255 para 10-to-1