Special

ENSDARG00000062744 @ danRer10

Biotype
protein_coding
Gene Symbol
scn1lab
Description
sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
Coordinates
chr6:10010985-10085137:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
92
chr6:10063995-10064086
-
62.96
84.42
3
Exon Skipping
92
chr6:10063710-10063801
-
35.19
34.86
3
Exon Skipping
36
chr6:10020602-10020637
-
8.2
65.17
0
Exon Skipping
42
chr6:10031777-10031818
-
24.16
72.05
0
Intron Retention
5193
chr6:10029231-10034423
-
20.89
46.83
0
Intron Retention
3181
chr6:10018803-10021983
-
16.2
69.3
0
Intron Retention
190
chr6:10064087-10064276
-
18.88
59.39
0
Intron Retention
7693
chr6:10056302-10063994
-
12.81
25.94
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg19 ENSG00000136531 SCN2A 2-to-5
Human hg19 ENSG00000136546 SCN7A 2-to-5
Human hg19 ENSG00000144285 SCN1A 2-to-5
Human hg19 ENSG00000153253 SCN3A 2-to-5
Human hg19 ENSG00000169432 SCN9A 2-to-5
Mouse mm10 ENSMUSG00000034810 Scn7a 2-to-5
Mouse mm10 ENSMUSG00000057182 Scn3a 2-to-5
Mouse mm10 ENSMUSG00000064329 Scn1a 2-to-5
Mouse mm10 ENSMUSG00000075316 Scn9a 2-to-5
Mouse mm10 ENSMUSG00000075318 Scn2a 2-to-5
Mouse mm9 ENSMUSG00000034810 Scn7a 2-to-5
Mouse mm9 ENSMUSG00000057182 Scn3a 2-to-5
Mouse mm9 ENSMUSG00000064329 Scn1a 2-to-5
Mouse mm9 ENSMUSG00000075316 Scn9a 2-to-5
Mouse mm9 ENSMUSG00000075318 Scn2a1 2-to-5
Cow bosTau6 ENSBTAG00000002425 SCN9A 2-to-5
Cow bosTau6 ENSBTAG00000018520 SCN1A 2-to-5
Cow bosTau6 ENSBTAG00000019137 SCN7A 2-to-5
Cow bosTau6 ENSBTAG00000019385 SCN3A 2-to-5
Cow bosTau6 ENSBTAG00000038180 SCN2A 2-to-5
Chicken galGal4 ENSGALG00000010943 SCN1A 2-to-4
Chicken galGal4 ENSGALG00000011009 SCN2A 2-to-4
Chicken galGal4 ENSGALG00000011040 SCN3A 2-to-4
Chicken galGal4 ENSGALG00000027793 2-to-4
Chicken galGal3 ENSGALG00000010943 E1C4S3_CHICK 2-to-4
Chicken galGal3 ENSGALG00000011009 F1NN72_CHICK 2-to-4
Chicken galGal3 ENSGALG00000011040 2-to-4
Fruitfly dm6 FBgn0264255 para 8-to-1