Special

ENSGALG00000010943 @ galGal4

Biotype
protein_coding
Gene Symbol
SCN1A
Description
sodium channel, voltage gated, type I alpha subunit [Source:HGNC Symbol;Acc:HGNC:10585]
Coordinates
chr7:19094498-19151896:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
275
chr7:19115258-19115532
+
73.07
36.65
0
Alternative 5'ss
308
chr7:19115258-19115565
+
24.82
36.65
0
Exon Skipping
282
chr7:19140426-19140707
+
91.62
42.91
0
Exon Skipping
56
chr7:19142966-19143021
+
19.23
82.13
0
Exon Skipping
89
chr7:19127487-19127575
+
8.96
69.23
0
Exon Skipping
111
chr7:19142498-19142608
+
3.51
17.63
0
Exon Skipping
123
chr7:19128511-19128633
+
86.67
90.48
0
Intron Retention
11792
chr7:19128634-19140425
+
15.23
21.41
0
Intron Retention
5792
chr7:19140708-19146499
+
13.99
13.69
0
Intron Retention
342
chr7:19149627-19149968
+
22.22
20.78
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000144285 SCN1A 1-to-1
Human hg19 ENSG00000144285 SCN1A 1-to-1
Mouse mm10 ENSMUSG00000064329 Scn1a 1-to-1
Mouse mm9 ENSMUSG00000064329 Scn1a 1-to-1
Cow bosTau6 ENSBTAG00000018520 SCN1A 1-to-1
Zebrafish danRer10 ENSDARG00000062744 scn1lab 4-to-2
Zebrafish danRer10 ENSDARG00000086819 scn1a 4-to-2
Fruitfly dm6 FBgn0264255 para 9-to-1