Special

ENSGALG00000027702 @ galGal4

Biotype
protein_coding
Gene Symbol
SCN11A
Description
sodium channel, voltage gated, type XI alpha subunit [Source:HGNC Symbol;Acc:HGNC:10583]
Coordinates
chr2:5301781-5338309:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
255
chr2:5329951-5330205
+
93.86
13.11
0
Exon Skipping
265
chr2:5335534-5335798
+
96.26
22.76
0
Exon Skipping
58
chr2:5313858-5313915
+
3.78
10.22
0
Intron Retention
1290
chr2:5302054-5303343
+
8.66
25.49
0
Intron Retention
837
chr2:5324999-5325835
+
13.65
16.99
0
Intron Retention
2377
chr2:5327574-5329950
+
12.77
36.99
0
Intron Retention
825
chr2:5330206-5331030
+
19.11
33.33
0
Intron Retention
427
chr2:5335107-5335533
+
5.44
20.45
0
Intron Retention
1369
chr2:5335799-5337167
+
7.08
23.07
0
Intron Retention
3232
chr2:5305476-5308707
+
27.4
62.96
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000168356 SCN11A 1-to-1
Human hg19 ENSG00000168356 SCN11A 1-to-1
Mouse mm10 ENSMUSG00000034115 Scn11a 1-to-1
Mouse mm9 ENSMUSG00000034115 Scn11a 1-to-1
Rat rn6 ENSRNOG00000032884 Scn11a 3-to-1
Cow bosTau6 ENSBTAG00000017174 SCN11A 1-to-1
Zebrafish danRer10 ENSDARG00000090724 scn12aa 3-to-2
Zebrafish danRer10 ENSDARG00000102312 CABZ01063402.1 3-to-2
Fruitfly dm6 FBgn0264255 para 9-to-1