Special

ENSDARG00000090724 @ danRer10

Biotype
protein_coding
Gene Symbol
scn12aa
Description
sodium channel, voltage gated, type XII, alpha a [Source:ZFIN;Acc:ZDB-GENE-060908-2]
Coordinates
chr2:52295271-52427287:-
Assembly
danRer10

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]


EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
84.7
24.14
0
Alternative 5'ss
24
chr2:52296783-52296806
-
15.3
24.14
0
Exon Skipping
92
chr2:52393561-52393652
-
98.92
6.45
5
Exon Skipping
54
chr2:52298354-52298407
-
100
0
1



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000168356 SCN11A 1-to-3
Human hg38 ENSG00000183873 SCN5A 1-to-3
Human hg38 ENSG00000185313 SCN10A 1-to-3
Human hg19 ENSG00000168356 SCN11A 2-to-3
Human hg19 ENSG00000183873 SCN5A 2-to-3
Human hg19 ENSG00000185313 SCN10A 2-to-3
Mouse mm9 ENSMUSG00000032511 Scn5a 2-to-3
Mouse mm9 ENSMUSG00000034115 Scn11a 2-to-3
Mouse mm9 ENSMUSG00000034533 Scn10a 2-to-3
Rat rn6 ENSRNOG00000015049 Scn5a 1-to-3
Rat rn6 ENSRNOG00000032473 Scn10a 1-to-3
Rat rn6 ENSRNOG00000032884 Scn11a 1-to-3
Cow bosTau6 ENSBTAG00000009155 SCN5A 2-to-3
Cow bosTau6 ENSBTAG00000017174 SCN11A 2-to-3
Cow bosTau6 ENSBTAG00000046911 SCN10A 2-to-3
Chicken galGal4 ENSGALG00000006072 SCN10A 2-to-3
Chicken galGal4 ENSGALG00000006112 SCN5A 2-to-3
Chicken galGal4 ENSGALG00000027702 SCN11A 2-to-3
Chicken galGal3 ENSGALG00000006072 E1BXV5_CHICK 2-to-3
Chicken galGal3 ENSGALG00000006112 F1NDB7_CHICK 2-to-3
Fruitfly dm6 FBgn0264255 para 8-to-1
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