Special

ENSG00000168356 @ hg38

Biotype
protein_coding
Gene Symbol
SCN11A
Description
sodium voltage-gated channel alpha subunit 11 [Source:HGNC Symbol;Acc:HGNC:10583]
Coordinates
chr3:38845769-38950561:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
79
chr3:38848073-38848151
-
10.42
22.03
0
Exon Skipping
44
chr3:38947043-38947086
-
3.54
15.15
0
Exon Skipping
198
chr3:38908997-38909194
-
97.3
10.79
0
Exon Skipping
432
chr3:38894533-38894964
-
96.67
10
0
Intron Retention
1276
chr3:38945513-38946788
-
23.02
62.5
0
Intron Retention
2738
chr3:38847743-38850480
-
15.6
31.15
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000034115 Scn11a 1-to-1
Mouse mm9 ENSMUSG00000034115 Scn11a 1-to-1
Rat rn6 ENSRNOG00000032884 Scn11a 1-to-1
Cow bosTau6 ENSBTAG00000017174 SCN11A 1-to-1
Chicken galGal4 ENSGALG00000027702 SCN11A 1-to-1
Zebrafish danRer10 ENSDARG00000090724 scn12aa 3-to-1
Fruitfly dm6 FBgn0264255 para 10-to-1