Special

ENSG00000136878 @ hg19

Biotype
protein_coding
Gene Symbol
USP20
Description
ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:12619]
Coordinates
chr9:132596977-132644107:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
88.64
11.23
0
Alternative 3'ss
18
chr9:132631169-132631186
+
11.36
11.23
0
Alternative 3'ss
0
NA
+
83.59
42.19
0
Alternative 3'ss
88
chr9:132642658-132642745
+
16.41
42.19
0
Exon Skipping
79
chr9:132627582-132627660
+
94.69
24.07
0
Intron Retention
307
chr9:132631282-132631588
+
12.7
46.6
0
Intron Retention
608
chr9:132632124-132632731
+
19.32
42.9
0
Intron Retention
2615
chr9:132612204-132614818
+
3.89
56.64
0
Intron Retention
177
chr9:132642569-132642745
+
31.74
59.78
0
Intron Retention
2003
chr9:132625579-132627581
+
7.68
79.14
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026854 Usp20 1-to-1
Mouse mm9 ENSMUSG00000026854 Usp20 1-to-1
Rat rn6 ENSRNOG00000007710 Usp20 1-to-1
Cow bosTau6 ENSBTAG00000020311 USP20 1-to-1
Chicken galGal4 ENSGALG00000004142 USP20 1-to-1
Chicken galGal3 ENSGALG00000004142 F1P4F0_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000027501 usp20 1-to-1
Fruitfly dm6 FBgn0033916 CG8494 2-to-1