Special

ENSG00000136878 @ hg38

Biotype
protein_coding
Gene Symbol
USP20
Description
ubiquitin specific peptidase 20 [Source:HGNC Symbol;Acc:HGNC:12619]
Coordinates
chr9:129834698-129881838:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
83.12
65.38
0
Alternative 3'ss
88
chr9:129880379-129880466
+
15.69
57.69
0
Exon Skipping
79
chr9:129865303-129865381
+
94.47
23.83
0
Intron Retention
307
chr9:129869003-129869309
+
11.84
46.6
0
Intron Retention
608
chr9:129869845-129870452
+
18.25
44.78
0
Intron Retention
2615
chr9:129849925-129852539
+
4.31
52.76
0
Intron Retention
177
chr9:129880290-129880466
+
31.35
73.31
0
Intron Retention
1573
chr9:129861613-129863185
+
5.38
26.19
0
Intron Retention
2003
chr9:129863300-129865302
+
8.04
81.16
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026854 Usp20 1-to-1
Mouse mm9 ENSMUSG00000026854 Usp20 1-to-1
Rat rn6 ENSRNOG00000007710 Usp20 1-to-1
Cow bosTau6 ENSBTAG00000020311 USP20 1-to-1
Chicken galGal4 ENSGALG00000004142 USP20 1-to-1
Chicken galGal3 ENSGALG00000004142 F1P4F0_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000027501 usp20 1-to-1
Fruitfly dm6 FBgn0033916 CG8494 2-to-1