Special

ENSG00000147316 @ hg38

Biotype
protein_coding
Gene Symbol
MCPH1
Description
microcephalin 1 [Source:HGNC Symbol;Acc:HGNC:6954]
Coordinates
chr8:6406592-6648504:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
238
chr8:6621454-6621691
+
96.75
30.77
0
Exon Skipping
142
chr8:6624896-6625037
+
5.4
86.36
0
Exon Skipping
113
chr8:6444393-6444505
+
87.37
24.14
0
Exon Skipping
172
chr8:6503216-6503387
+
1.38
55.03
0
Exon Skipping
162
chr8:6406528-6406689
+
90.67
34.47
0
Exon Skipping
298
chr8:6477154-6477451
+
0.86
58.39
0
Exon Skipping
159
chr8:6625957-6626115
+
3.38
41.38
0
Exon Skipping
903
chr8:6444645-6445547
+
79.67
32.86
0
Intron Retention
121524
chr8:6499930-6621453
+
8.49
38.03
0
Intron Retention
9595
chr8:6445548-6455142
+
21.57
40.93
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000039842 Mcph1 1-to-1
Mouse mm9 ENSMUSG00000039842 Mcph1 1-to-1
Rat rn6 ENSRNOG00000028586 Mcph1 1-to-1
Cow bosTau6 ENSBTAG00000011032 MCPH1 1-to-1
Chicken galGal4 ENSGALG00000016332 MCPH1 1-to-1
Chicken galGal3 ENSGALG00000016332 MCPH1 1-to-1
Zebrafish danRer10 ENSDARG00000058372 mcph1 1-to-1
Fruitfly dm6 FBgn0260959 MCPH1 1-to-1