Special

ENSG00000154258 @ hg19

Biotype
protein_coding
Gene Symbol
ABCA9
Description
ATP-binding cassette, sub-family A (ABC1), member 9 [Source:HGNC Symbol;Acc:39]
Coordinates
chr17:66970629-67057136:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
208
chr17:67045424-67045631
-
95.07
27.78
0
Exon Skipping
161
chr17:66982305-66982465
-
97.7
18.24
0
Exon Skipping
95
chr17:66981026-66981120
-
90.52
52.28
0
Exon Skipping
114
chr17:67003900-67004013
-
95.85
30.38
0
Intron Retention
190
chr17:67023591-67023780
-
7.76
28.02
0
Intron Retention
508
chr17:67022609-67023116
-
13.7
42.22
0
Intron Retention
2023
chr17:67020495-67022517
-
26.43
94.02
0
Intron Retention
1540
chr17:67045632-67047171
-
10.89
42.02
0
Intron Retention
749
chr17:66988408-66989156
-
11.35
27.66
0
Intron Retention
1217
chr17:66987099-66988315
-
18.37
50.52
0
Intron Retention
694
chr17:66985260-66985953
-
26.78
58.36
0
Intron Retention
73
chr17:66981121-66981193
-
29.89
31.33
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000041797 Abca9 1-to-1
Mouse mm9 ENSMUSG00000041797 Abca9 1-to-1
Rat rn6 ENSRNOG00000059326 Abca9 1-to-1
Cow bosTau6 ENSBTAG00000006896 ABCA9 2-to-1
Chicken galGal4 ENSGALG00000021395 4-to-2
Chicken galGal4 ENSGALG00000021399 4-to-2
Chicken galGal3 ENSGALG00000021395 4-to-2
Chicken galGal3 ENSGALG00000021399 4-to-2
Zebrafish danRer10 ENSDARG00000074041 abca5 5-to-1