Special

ENSG00000159307 @ hg38

Biotype
protein_coding
Gene Symbol
SCUBE1
Description
signal peptide, CUB domain and EGF like domain containing 1 [Source:HGNC Symbol;Acc:HGNC:13441]
Coordinates
chr22:43197283-43343388:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
90
chr22:43255488-43255577
-
15.52
43.16
0
Exon Skipping
115
chr22:43320705-43320819
-
0.96
29.87
0
Intron Retention
4003
chr22:43214252-43218254
-
28.16
37.92
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000016763 Scube1 1-to-1
Mouse mm9 ENSMUSG00000016763 Scube1 1-to-1
Rat rn6 ENSRNOG00000010617 Scube1 1-to-1
Cow bosTau6 ENSBTAG00000011275 SCUBE1 1-to-1
Chicken galGal4 ENSGALG00000014178 SCUBE1 1-to-1
Chicken galGal3 ENSGALG00000014178 SCUBE1 1-to-1
Zebrafish danRer10 ENSDARG00000063097 scube1 1-to-1
Fruitfly dm6 FBgn0052373 CG32373 7-to-1