ENSBTAG00000011275 @ bosTau6

Biotype

protein_coding

Gene Symbol

SCUBE1

Description

signal peptide, CUB domain, EGF-like 1 [Source:HGNC Symbol;Acc:HGNC:13441]

Coordinates

chr5:114644629-114767260:-

Assembly

bosTau6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

BtaALTD0019239-1/2

Alternative 5'ss

0

NA

-

85.98

27.79

0

BtaALTD0019239-2/2

Alternative 5'ss

38

chr5:114671666-114671703

-

14.02

27.79

0

BtaEX0031628

Exon Skipping

90

chr5:114690000-114690089

-

40.68

65.82

0

BtaEX6025474

Exon Skipping

117

chr5:114692769-114692885

-

98.87

11.3

0

BtaINT0129730

Intron Retention

2012

chr5:114655175-114657186

-

12.14

32.1

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000159307	SCUBE1	1-to-1
Human	hg19	ENSG00000159307	SCUBE1	1-to-1
Mouse	mm10	ENSMUSG00000016763	Scube1	1-to-1
Mouse	mm9	ENSMUSG00000016763	Scube1	1-to-1
Rat	rn6	ENSRNOG00000010617	Scube1	1-to-1
Chicken	galGal4	ENSGALG00000014178	SCUBE1	1-to-1
Chicken	galGal3	ENSGALG00000014178	SCUBE1	1-to-1
Zebrafish	danRer10	ENSDARG00000063097	scube1	1-to-1
Fruitfly	dm6	FBgn0052373	CG32373	7-to-1