Special

ENSG00000160401 @ hg19

Biotype
protein_coding
Gene Symbol
C9orf117
Description
chromosome 9 open reading frame 117 [Source:HGNC Symbol;Acc:27843]
Coordinates
chr9:130469268-130478281:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
25.58
30.28
0
Alternative 5'ss
20
chr9:130474210-130474229
+
74.42
30.28
0
Exon Skipping
187
chr9:130475299-130475485
+
57.29
49
0
Intron Retention
907
chr9:130471973-130472879
+
83.63
75.17
0
Intron Retention
474
chr9:130473034-130473507
+
57.06
96.07
0
Intron Retention
323
chr9:130473776-130474098
+
56.11
91.68
0
Intron Retention
248
chr9:130474230-130474477
+
80.56
62.5
0
Intron Retention
359
chr9:130474629-130474987
+
84.42
77.91
0
Intron Retention
144
chr9:130475155-130475298
+
62.36
92.11
0
Intron Retention
627
chr9:130475486-130476112
+
88.23
67.1
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000038987 Cfap157 1-to-1
Mouse mm9 ENSMUSG00000038987 1700019L03Rik 1-to-1
Rat rn6 ENSRNOG00000039315 Cfap157 1-to-1
Cow bosTau6 ENSBTAG00000012735 C9orf117 1-to-1
Zebrafish danRer10 ENSDARG00000099042 C5H9orf117 1-to-1
Fruitfly dm6 FBgn0036962 CG17122 1-to-1