Special

ENSG00000165699 @ hg38

Biotype
protein_coding
Gene Symbol
TSC1
Description
tuberous sclerosis 1 [Source:HGNC Symbol;Acc:HGNC:12362]
Coordinates
chr9:132891348-132944633:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
28.97
59.89
0
Alternative 3'ss
3
chr9:132910690-132910692
-
71.03
59.89
0
Alternative 3'ss
0
NA
-
99.56
52.05
0
Alternative 3'ss
77
chr9:132928953-132929029
-
0.44
52.05
0
Alternative 5'ss
0
NA
-
5.9
50
0
Alternative 5'ss
42
chr9:132901589-132901630
-
94.1
50
0
Exon Skipping
112
chr9:132911002-132911113
-
96.7
61.05
0
Exon Skipping
74
chr9:132921363-132921436
-
98.45
25
0
Exon Skipping
44
chr9:132904411-132904454
-
96.3
31.11
0
Exon Skipping
104
chr9:132927201-132927304
-
97.35
47.83
0
Exon Skipping
153
chr9:132925587-132925739
-
95.3
76.49
0
Exon Skipping
49
chr9:132934466-132934514
-
0.48
27.08
0
Exon Skipping
219
chr9:132931209-132931427
-
2.52
30.7
0
Intron Retention
309
chr9:132910693-132911001
-
30.88
75.98
0
Intron Retention
465
chr9:132906836-132907300
-
15.78
47.06
0
Intron Retention
591
chr9:132906140-132906730
-
14.98
73.89
0
Intron Retention
593
chr9:132903818-132904410
-
8.94
55.08
0
Intron Retention
339
chr9:132911114-132911452
-
29.35
71.43
0
Intron Retention
3200
chr9:132907371-132910570
-
17.3
40.32
0
Intron Retention
2094
chr9:132923493-132925586
-
11.48
43.02
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026812 Tsc1 1-to-1
Mouse mm9 ENSMUSG00000026812 Tsc1 1-to-1
Rat rn6 ENSRNOG00000011470 Tsc1 1-to-1
Cow bosTau6 ENSBTAG00000005190 TSC1 1-to-1
Chicken galGal4 ENSGALG00000003500 TSC1 1-to-1
Chicken galGal3 ENSGALG00000003500 TSC1 1-to-1
Zebrafish danRer10 ENSDARG00000026048 tsc1a 1-to-2
Zebrafish danRer10 ENSDARG00000057918 tsc1b 1-to-2
Fruitfly dm6 FBgn0026317 Tsc1 1-to-1