Special

ENSG00000179954 @ hg38

Biotype
protein_coding
Gene Symbol
SSC5D
Description
scavenger receptor cysteine rich family member with 5 domains [Source:HGNC Symbol;Acc:HGNC:26641]
Coordinates
chr19:55488404-55519098:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
114
chr19:55489882-55489995
+
95.55
74.82
0
Exon Skipping
318
chr19:55497880-55498197
+
93.24
20.73
0
Intron Retention
363
chr19:55490409-55490771
+
5.29
33.33
0
Intron Retention
2514
chr19:55491081-55493594
+
14.49
85.83
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000035279 Ssc5d 1-to-1
Mouse mm9 ENSMUSG00000035279 A430110N23Rik 1-to-1
Rat rn6 ENSRNOG00000016687 Ssc5d 1-to-1
Cow bosTau6 ENSBTAG00000030885 SSC5D 1-to-1
Zebrafish danRer10 ENSDARG00000018770 SSC5D (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000045837 SSC5D (2 of 2) 1-to-2