Special

ENSMUSG00000035279 @ mm10

Biotype
protein_coding
Gene Symbol
Ssc5d
Description
scavenger receptor cysteine rich family, 5 domains [Source:MGI Symbol;Acc:MGI:3606211]
Coordinates
chr7:4925785-4944826:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
309
chr7:4926974-4927282
+
93.87
25.31
0
Intron Retention
242
chr7:4937223-4937464
+
15.18
65
0
Intron Retention
2810
chr7:4933453-4936262
+
24.03
92.88
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000179954 SSC5D 1-to-1
Human hg19 ENSG00000179954 AC008735.1 1-to-1
Rat rn6 ENSRNOG00000016687 Ssc5d 1-to-1
Cow bosTau6 ENSBTAG00000030885 SSC5D 1-to-1
Chicken galGal4 ENSGALG00000009103 1-to-4
Chicken galGal4 ENSGALG00000009118 PIT54 1-to-4
Chicken galGal4 ENSGALG00000026051 1-to-4
Chicken galGal4 ENSGALG00000028894 1-to-4
Chicken galGal3 ENSGALG00000009103 1-to-4
Chicken galGal3 ENSGALG00000009118 PIT 54 1-to-4