Special

ENSG00000187626 @ hg38

Biotype
protein_coding
Gene Symbol
ZKSCAN4
Description
zinc finger with KRAB and SCAN domains 4 [Source:HGNC Symbol;Acc:HGNC:13854]
Coordinates
chr6:28244623-28252224:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
99.08
58.33
0
Alternative 3'ss
37
chr6:28245976-28246012
-
0.92
58.33
0
Alternative 5'ss
0
NA
-
3.31
63.46
0
Alternative 5'ss
222
chr6:28251645-28251866
-
12.13
63.17
0
Alternative 5'ss
309
chr6:28251558-28251866
-
79.35
69.94
0
Exon Skipping
484
chr6:28251558-28252041
-
46.58
30.31
0
Exon Skipping
148
chr6:28249687-28249834
-
98.89
57.98
0
Exon Skipping
83
chr6:28248067-28248149
-
95.51
36.36
0
Exon Skipping
124
chr6:28246969-28247092
-
96.12
67.96
0
Intron Retention
974
chr6:28247093-28248066
-
8.89
29.58
0
Intron Retention
993
chr6:28245976-28246968
-
7.5
57.56
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021327 Zkscan3 2-to-2
Mouse mm10 ENSMUSG00000054931 Zkscan4 2-to-2
Mouse mm9 ENSMUSG00000021327 Zkscan3 2-to-2
Mouse mm9 ENSMUSG00000054931 Zkscan4 2-to-2
Rat rn6 ENSRNOG00000051823 Zkscan4 2-to-2
Rat rn6 ENSRNOG00000055000 Zkscan3 2-to-2
Cow bosTau6 ENSBTAG00000003575 ZKSCAN4 2-to-1