Special

ENSG00000188517 @ hg19

Biotype
protein_coding
Gene Symbol
COL25A1
Description
collagen, type XXV, alpha 1 [Source:HGNC Symbol;Acc:18603]
Coordinates
chr4:109731877-110223813:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
60
chr4:109863365-109863424
-
39.22
92.77
0
Exon Skipping
24
chr4:109774058-109774081
-
27.66
96.81
0
Exon Skipping
37
chr4:110132709-110132745
-
6.51
54.85
0
Exon Skipping
45
chr4:109805334-109805378
-
26.41
83.14
0
Exon Skipping
72
chr4:109862522-109862593
-
9
32.74
0
Exon Skipping
45
chr4:109783657-109783701
-
38.74
100
0
Exon Skipping
45
chr4:109782083-109782127
-
84.44
56.01
0
Exon Skipping
81
chr4:109759254-109759334
-
40.87
57.72
0
Exon Skipping
36
chr4:109755511-109755546
-
65.52
92.18
0
Exon Skipping
54
chr4:109753536-109753589
-
95.04
12.92
0
Exon Skipping
54
chr4:109748291-109748344
-
94.94
14.57
0
Exon Skipping
27
chr4:109746352-109746378
-
66.55
75.81
0
Exon Skipping
87
chr4:109740968-109741054
-
77.97
95.96
0
Exon Skipping
78
chr4:109740408-109740485
-
14.16
98.04
0
Exon Skipping
36
chr4:109810377-109810412
-
97.46
10.55
0
Intron Retention
93
chr4:110223232-110223324
-
86.64
42.42
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000058897 Col25a1 1-to-1
Mouse mm9 ENSMUSG00000058897 Col25a1 1-to-1
Rat rn6 ENSRNOG00000050706 Col25a1 1-to-1
Cow bosTau6 ENSBTAG00000017282 COL25A1 1-to-1
Chicken galGal4 ENSGALG00000010521 COL25A1 1-to-1
Chicken galGal3 ENSGALG00000010521 COL25A1 1-to-1
Fruitfly dm6 FBgn0259244 CG42342 8-to-1