Special

ENSG00000197565 @ hg19

Biotype
protein_coding
Gene Symbol
COL4A6
Description
collagen, type IV, alpha 6 [Source:HGNC Symbol;Acc:2208]
Coordinates
chrX:107386780-107682727:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
99
chrX:107407830-107407928
-
94.93
20.75
0
Exon Skipping
126
chrX:107418320-107418445
-
96.06
18
0
Exon Skipping
72
chrX:107413175-107413246
-
86.78
82.49
0
Exon Skipping
117
chrX:107408600-107408716
-
90.24
73.3
0
Intron Retention
714
chrX:107402979-107403692
-
14.47
38.07
0
Intron Retention
2371
chrX:107454971-107457341
-
11.29
38.32
0
Intron Retention
1667
chrX:107453235-107454901
-
10.76
25.69
0
Intron Retention
822
chrX:107448926-107449747
-
11.63
38.94
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000031273 Col4a6 1-to-1
Mouse mm9 ENSMUSG00000031273 Col4a6 1-to-1
Rat rn6 ENSRNOG00000056772 Col4a6 1-to-1
Cow bosTau6 ENSBTAG00000013760 COL4A6 1-to-1
Chicken galGal4 ENSGALG00000008266 COL4A6 1-to-1
Chicken galGal3 ENSGALG00000008266 COL4A6 1-to-1
Zebrafish danRer10 ENSDARG00000052061 col4a6 3-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2