Special

FBgn0016075 @ dm6

Biotype
protein_coding
Gene Symbol
vkg
Description
The gene viking is referred to in FlyBase by the symbol Dmelvkg (CG16858, FBgn0016075). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (1 unique). Gene sequence location is 2L:5012144..5028191. Its molecular function is described by: extracellular matrix structural constituent. It is involved in the biological process described with: anterior Malpighian tubule development; extracellular matrix organization; basement membrane organization; Malpighian tubule morphogenesis; somatic muscle development. 43 alleles are reported. The phenotypes of these alleles manifest in: wing; ventral nerve cord; embryonic anterior Malpighian tubule; A1-7 segment border muscle. The phenotypic classes of alleles include: hypoactive; increased mortality during development; phenotype; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of very high expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages.
Coordinates
chr2L:5012144-5028191:-
Assembly
dm6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)


Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000080573 COL5A3 2-to-17
Human hg38 ENSG00000108821 COL1A1 2-to-17
Human hg38 ENSG00000130635 COL5A1 2-to-17
Human hg38 ENSG00000187498 COL4A1 2-to-17
Human hg38 ENSG00000196739 COL27A1 2-to-17
Human hg19 ENSG00000080573 COL5A3 2-to-17
Human hg19 ENSG00000108821 COL1A1 2-to-17
Human hg19 ENSG00000130635 COL5A1 2-to-17
Human hg19 ENSG00000187498 COL4A1 2-to-17
Human hg19 ENSG00000196739 COL27A1 2-to-17
Mouse mm10 ENSMUSG00000027966 Col11a1 2-to-17
Mouse mm10 ENSMUSG00000031273 Col4a6 2-to-17
Mouse mm10 ENSMUSG00000031274 Col4a5 2-to-17
Mouse mm10 ENSMUSG00000045672 Col27a1 2-to-17
Mouse mm10 ENSMUSG00000067158 Col4a4 2-to-17
Mouse mm9 ENSMUSG00000027966 Col11a1 2-to-17
Mouse mm9 ENSMUSG00000031273 Col4a6 2-to-17
Mouse mm9 ENSMUSG00000031274 Col4a5 2-to-17
Mouse mm9 ENSMUSG00000045672 Col27a1 2-to-17
Mouse mm9 ENSMUSG00000067158 Col4a4 2-to-17
Cow bosTau6 ENSBTAG00000013472 COL1A2 2-to-16
Cow bosTau6 ENSBTAG00000021310 COL4A4 2-to-16
Cow bosTau6 ENSBTAG00000021466 COL3A1 2-to-16
Cow bosTau6 ENSBTAG00000025210 COL4A2 2-to-16
Cow bosTau6 ENSBTAG00000047998 COL5A1 2-to-16
Chicken galGal4 ENSGALG00000002546 COL5A1 2-to-17
Chicken galGal4 ENSGALG00000008141 COL4A5 2-to-17
Chicken galGal4 ENSGALG00000009641 COL1A2 2-to-17
Chicken galGal3 ENSGALG00000002546 Q90689_CHICK 2-to-17
Chicken galGal3 ENSGALG00000008141 COL4A5 2-to-17
Chicken galGal3 ENSGALG00000009641 COL1A2 2-to-17
Zebrafish danRer10 ENSDARG00000002295 si:dkey-21p1.3 2-to-24
Zebrafish danRer10 ENSDARG00000012405 col1a1a 2-to-24
Zebrafish danRer10 ENSDARG00000026165 col11a1a 2-to-24
Zebrafish danRer10 ENSDARG00000035809 col1a1b 2-to-24
Zebrafish danRer10 ENSDARG00000099930 col27a1b 2-to-24
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