Special

ENSBTAG00000047998 @ bosTau6

Biotype
protein_coding
Gene Symbol
COL5A1
Description
collagen, type V, alpha 1 [Source:HGNC Symbol;Acc:HGNC:2209]
Coordinates
chr11:106856171-106994803:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
69
chr11:106865903-106865971
-
79.17
88.89
0
Intron Retention
3615
chr11:106862288-106865902
-
10.67
43.15
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130635 COL5A1 1-to-1
Human hg19 ENSG00000130635 COL5A1 1-to-1
Mouse mm10 ENSMUSG00000026837 Col5a1 1-to-1
Mouse mm9 ENSMUSG00000026837 Col5a1 1-to-1
Rat rn6 ENSRNOG00000008749 Col5a1 1-to-1
Chicken galGal4 ENSGALG00000002546 COL5A1 1-to-1
Chicken galGal3 ENSGALG00000002546 Q90689_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000012593 col5a1 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 16-to-2
Fruitfly dm6 FBgn0016075 vkg 16-to-2