Special

ENSG00000130635 @ hg19

Biotype
protein_coding
Gene Symbol
COL5A1
Description
collagen, type V, alpha 1 [Source:HGNC Symbol;Acc:2209]
Coordinates
chr9:137533620-137736686:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
69
chr9:137721822-137721890
+
81.91
65.49
0
Exon Skipping
69
chr9:137721954-137722022
+
17.33
63.66
0
Exon Skipping
132
chr9:137619112-137619243
+
99.99
0.52
1
Intron Retention
3492
chr9:137690308-137693799
+
8.99
43.92
0
Intron Retention
1873
chr9:137712070-137713942
+
2.64
51.87
0
Intron Retention
382
chr9:137714880-137715261
+
1.36
53.8
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026837 Col5a1 1-to-1
Mouse mm9 ENSMUSG00000026837 Col5a1 1-to-1
Rat rn6 ENSRNOG00000008749 Col5a1 1-to-1
Cow bosTau6 ENSBTAG00000047998 COL5A1 1-to-1
Chicken galGal4 ENSGALG00000002546 COL5A1 1-to-1
Chicken galGal3 ENSGALG00000002546 Q90689_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000012593 col5a1 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2