Special

ENSMUSG00000026837 @ mm10

Biotype
protein_coding
Gene Symbol
Col5a1
Description
collagen, type V, alpha 1 [Source:MGI Symbol;Acc:MGI:88457]
Coordinates
chr2:27886425-28039514:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
98.23
77.32
0
Alternative 5'ss
404
chr2:28001624-28002027
+
1.77
77.32
0
Exon Skipping
69
chr2:28028967-28029035
+
71.91
79.17
0
Exon Skipping
132
chr2:27949627-27949758
+
100
0.12
1



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130635 COL5A1 1-to-1
Human hg19 ENSG00000130635 COL5A1 1-to-1
Rat rn6 ENSRNOG00000008749 Col5a1 1-to-1
Cow bosTau6 ENSBTAG00000047998 COL5A1 1-to-1
Chicken galGal4 ENSGALG00000002546 COL5A1 1-to-1
Chicken galGal3 ENSGALG00000002546 Q90689_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000012593 col5a1 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2