Special

ENSDARG00000012593 @ danRer10

Biotype
protein_coding
Gene Symbol
col5a1
Description
procollagen, type V, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-041105-6]
Coordinates
chr21:6634384-6803529:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
69
chr21:6790074-6790142
+
54.12
67.17
0
Exon Skipping
69
chr21:6790195-6790263
+
45.29
65.6
0
Intron Retention
690
chr21:6770483-6771172
+
9.72
96.12
0
Intron Retention
87
chr21:6771227-6771313
+
8.88
100
0
Intron Retention
203
chr21:6771368-6771570
+
11.39
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130635 COL5A1 1-to-1
Human hg19 ENSG00000130635 COL5A1 1-to-1
Mouse mm10 ENSMUSG00000026837 Col5a1 1-to-1
Mouse mm9 ENSMUSG00000026837 Col5a1 1-to-1
Rat rn6 ENSRNOG00000008749 Col5a1 1-to-1
Cow bosTau6 ENSBTAG00000047998 COL5A1 1-to-1
Chicken galGal4 ENSGALG00000002546 COL5A1 1-to-1
Chicken galGal3 ENSGALG00000002546 Q90689_CHICK 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 24-to-2
Fruitfly dm6 FBgn0016075 vkg 24-to-2