Special

ENSDARG00000026165 @ danRer10

Biotype
protein_coding
Gene Symbol
col11a1a
Description
collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
Coordinates
chr24:28684862-28814144:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
26.05
37.1
0
Alternative 3'ss
3
chr24:28807417-28807419
-
73.95
37.1
0
Exon Skipping
54
chr24:28739300-28739353
-
85.13
71.7
0
Exon Skipping
45
chr24:28739174-28739218
-
82.04
71.68
0
Exon Skipping
54
chr24:28738424-28738477
-
81.32
75.51
0
Exon Skipping
54
chr24:28738292-28738345
-
83.03
76.78
0
Exon Skipping
54
chr24:28737301-28737354
-
83.29
73.12
0
Exon Skipping
108
chr24:28737116-28737223
-
84.59
68.67
0
Exon Skipping
90
chr24:28735489-28735578
-
85.3
63.06
0
Exon Skipping
54
chr24:28730715-28730768
-
84.86
63.4
0
Exon Skipping
108
chr24:28727890-28727997
-
85.44
68.49
0
Exon Skipping
108
chr24:28727637-28727744
-
86.98
72.96
0
Exon Skipping
54
chr24:28726695-28726748
-
86.31
74.77
0
Exon Skipping
54
chr24:28724557-28724610
-
86.01
74.02
0
Exon Skipping
108
chr24:28724362-28724469
-
86.51
72.14
0
Exon Skipping
54
chr24:28718200-28718253
-
84.48
65.65
0
Exon Skipping
54
chr24:28718051-28718104
-
83.82
67.27
0
Exon Skipping
54
chr24:28717867-28717920
-
84.77
66.82
0
Exon Skipping
54
chr24:28716920-28716973
-
87.09
57.72
0
Exon Skipping
108
chr24:28716142-28716249
-
87.78
54.7
0
Exon Skipping
54
chr24:28715535-28715588
-
88.59
42.56
0
Exon Skipping
54
chr24:28708699-28708752
-
88.43
28.12
0
Exon Skipping
108
chr24:28706807-28706914
-
89.49
21.32
0
Exon Skipping
54
chr24:28706167-28706220
-
80.76
27.72
0
Exon Skipping
87
chr24:28775239-28775325
-
75.54
53.44
0
Exon Skipping
165
chr24:28773446-28773610
-
4.22
34.71
0
Exon Skipping
99
chr24:28773139-28773237
-
95.74
38.5
0
Exon Skipping
297
chr24:28769933-28770229
-
79.65
98.41
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000060718 COL11A1 2-to-1
Human hg19 ENSG00000060718 COL11A1 2-to-1
Mouse mm10 ENSMUSG00000027966 Col11a1 2-to-1
Mouse mm9 ENSMUSG00000027966 Col11a1 2-to-1
Rat rn6 ENSRNOG00000023148 Col11a1 2-to-1
Cow bosTau6 ENSBTAG00000021217 COL11A1 2-to-1
Chicken galGal4 ENSGALG00000005180 COL11A1 2-to-1
Chicken galGal3 ENSGALG00000005180 COL11A1 2-to-1
Fruitfly dm6 FBgn0000299 Cg25C 24-to-2
Fruitfly dm6 FBgn0016075 vkg 24-to-2