Special

ENSG00000060718 @ hg19

Biotype
protein_coding
Gene Symbol
COL11A1
Description
collagen, type XI, alpha 1 [Source:HGNC Symbol;Acc:2186]
Coordinates
chr1:103342023-103574052:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
16
chr1:103445153-103445168
-
6.92
41.46
0
Exon Skipping
205
chr1:103430717-103430921
-
4.12
44.69
0
Exon Skipping
100
chr1:103360921-103361020
-
4.82
31.29
0
Exon Skipping
46
chr1:103478838-103478883
-
4.75
27.87
0
Exon Skipping
153
chr1:103491356-103491508
-
8.55
48.15
0
Intron Retention
2041
chr1:103478026-103480066
-
5.45
31.8
0
Intron Retention
3896
chr1:103474073-103477968
-
5.49
42.2
0
Intron Retention
4702
chr1:103444992-103449693
-
8.37
56.47
0
Intron Retention
3824
chr1:103440440-103444263
-
8.77
80.28
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000027966 Col11a1 1-to-1
Mouse mm9 ENSMUSG00000027966 Col11a1 1-to-1
Rat rn6 ENSRNOG00000023148 Col11a1 1-to-1
Cow bosTau6 ENSBTAG00000021217 COL11A1 1-to-1
Chicken galGal4 ENSGALG00000005180 COL11A1 1-to-1
Chicken galGal3 ENSGALG00000005180 COL11A1 1-to-1
Zebrafish danRer10 ENSDARG00000009014 col11a1b 1-to-2
Zebrafish danRer10 ENSDARG00000026165 col11a1a 1-to-2
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2