Special

ENSMUSG00000027966 @ mm9

Biotype
protein_coding
Gene Symbol
Col11a1
Description
collagen, type XI, alpha 1 [Source:MGI Symbol;Acc:MGI:88446]
Coordinates
chr3:113733458-113923636:+
Assembly
mm9
Other assemblies
mm10

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
255
chr3:113799918-113800172
+
95.34
59.16
0
Exon Skipping
16
chr3:113841089-113841104
+
10.53
100
0
Exon Skipping
117
chr3:113797435-113797551
+
97.01
56.27
0
Exon Skipping
153
chr3:113797779-113797931
+
2.87
53.99
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000060718 COL11A1 1-to-1
Human hg19 ENSG00000060718 COL11A1 1-to-1
Rat rn6 ENSRNOG00000023148 Col11a1 1-to-1
Cow bosTau6 ENSBTAG00000021217 COL11A1 1-to-1
Chicken galGal4 ENSGALG00000005180 COL11A1 1-to-1
Chicken galGal3 ENSGALG00000005180 COL11A1 1-to-1
Zebrafish danRer10 ENSDARG00000009014 col11a1b 1-to-2
Zebrafish danRer10 ENSDARG00000026165 col11a1a 1-to-2
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2
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