Special

ENSG00000108821 @ hg19

Biotype
protein_coding
Gene Symbol
COL1A1
Description
collagen, type I, alpha 1 [Source:HGNC Symbol;Acc:2197]
Coordinates
chr17:48260650-48278993:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
99
chr17:48271304-48271402
-
98.82
42.06
0
Exon Skipping
54
chr17:48272408-48272461
-
99.18
27.43
0
Intron Retention
163
chr17:48275147-48275309
-
2.43
92.78
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000001506 Col1a1 1-to-1
Mouse mm9 ENSMUSG00000001506 Col1a1 1-to-1
Rat rn6 ENSRNOG00000003897 Col1a1 1-to-1
Cow bosTau6 ENSBTAG00000013103 COL1A1 1-to-1
Chicken galGal4 ENSGALG00000023973 1-to-1
Chicken galGal3 ENSGALG00000023973 1-to-1
Zebrafish danRer10 ENSDARG00000012405 col1a1a 1-to-2
Zebrafish danRer10 ENSDARG00000035809 col1a1b 1-to-2
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2