Special

ENSG00000080573 @ hg19

Biotype
protein_coding
Gene Symbol
COL5A3
Description
collagen, type V, alpha 3 [Source:HGNC Symbol;Acc:14864]
Coordinates
chr19:10070237-10121147:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
113
chr19:10076990-10077102
-
98.7
42.12
0
Intron Retention
113
chr19:10091369-10091481
-
5.54
78.38
0
Intron Retention
176
chr19:10081705-10081880
-
6.72
86.17
0
Intron Retention
299
chr19:10081352-10081650
-
7.1
87.11
0
Intron Retention
86
chr19:10078616-10078701
-
6.47
83.28
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000004098 Col5a3 1-to-1
Mouse mm9 ENSMUSG00000004098 Col5a3 1-to-1
Rat rn6 ENSRNOG00000020525 Col5a3 1-to-1
Cow bosTau6 ENSBTAG00000010179 COL5A3 1-to-1
Zebrafish danRer10 ENSDARG00000098294 col5a3a 1-to-3
Zebrafish danRer10 ENSDARG00000098567 si:ch1073-286c18.5 1-to-3
Zebrafish danRer10 ENSDARG00000101816 col5a3b 1-to-3
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2