Special

ENSDARG00000101816 @ danRer10

Biotype
protein_coding
Gene Symbol
col5a3b
Description
collagen, type V, alpha 3b [Source:ZFIN;Acc:ZDB-GENE-110728-4]
Coordinates
chr1:58545607-58581062:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
51.38
38.95
0
Alternative 3'ss
3
chr1:58577450-58577452
-
48.62
38.95
0
Intron Retention
148
chr1:58568289-58568436
-
4.93
56.5
0
Intron Retention
110
chr1:58567963-58568072
-
5.28
53.58
0
Intron Retention
117
chr1:58567801-58567917
-
8.29
89.69
0
Intron Retention
79
chr1:58567668-58567746
-
6.32
73.17
0
Intron Retention
97
chr1:58556223-58556319
-
6.87
52.37
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000080573 COL5A3 2-to-1
Human hg19 ENSG00000080573 COL5A3 3-to-1
Mouse mm10 ENSMUSG00000004098 Col5a3 2-to-1
Mouse mm9 ENSMUSG00000004098 Col5a3 3-to-1
Rat rn6 ENSRNOG00000020525 Col5a3 2-to-1
Cow bosTau6 ENSBTAG00000010179 COL5A3 3-to-1
Fruitfly dm6 FBgn0000299 Cg25C 24-to-2
Fruitfly dm6 FBgn0016075 vkg 24-to-2