Special

ENSG00000204859 @ hg38

Biotype
protein_coding
Gene Symbol
ZBTB48
Description
zinc finger and BTB domain containing 48 [Source:HGNC Symbol;Acc:HGNC:4930]
Coordinates
chr1:6580001-6589280:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
46.29
71.94
0
Alternative 5'ss
21
chr1:6580050-6580070
+
53.71
71.94
0
Exon Skipping
242
chr1:6582058-6582299
+
94.91
19.8
0
Exon Skipping
112
chr1:6585919-6586030
+
93.72
31.21
0
Intron Retention
404
chr1:6580137-6580540
+
20.45
79.59
0
Intron Retention
71
chr1:6588845-6588915
+
7.54
64.09
0
Intron Retention
758
chr1:6581300-6582057
+
21.25
46.03
0
Intron Retention
3619
chr1:6582300-6585918
+
35.07
88.46
0
Intron Retention
664
chr1:6586031-6586694
+
23.96
85.61
0
Intron Retention
417
chr1:6586788-6587204
+
12.33
46.96
0
Intron Retention
186
chr1:6587292-6587477
+
6.31
57.69
0
Intron Retention
427
chr1:6587633-6588059
+
12.44
87.02
0
Intron Retention
81
chr1:6588197-6588277
+
6.1
86.36
0
Intron Retention
313
chr1:6588443-6588755
+
9.37
51.15
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000028952 Zbtb48 1-to-1
Mouse mm9 ENSMUSG00000028952 Zbtb48 1-to-1
Rat rn6 ENSRNOG00000009595 Zbtb48 1-to-1
Cow bosTau6 ENSBTAG00000016735 ZBTB48 1-to-1
Chicken galGal4 ENSGALG00000000637 ZBTB48 1-to-1
Chicken galGal3 ENSGALG00000000637 ZBTB48 1-to-1
Zebrafish danRer10 ENSDARG00000039263 zbtb48 1-to-1
Fruitfly dm6 FBgn0051365 CG31365 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"