Special

ENSMUSG00000026042 @ mm10

Biotype
protein_coding
Gene Symbol
Col5a2
Description
collagen, type V, alpha 2 [Source:MGI Symbol;Acc:MGI:88458]
Coordinates
chr1:45374321-45503282:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
669
chr1:45421275-45421943
-
1.57
63.19
0
Intron Retention
184
chr1:45392869-45393052
-
2.41
62.57
0
Intron Retention
1242
chr1:45422440-45423681
-
1.81
69.27
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000204262 COL5A2 1-to-1
Human hg19 ENSG00000204262 COL5A2 1-to-1
Rat rn6 ENSRNOG00000003736 Col5a2 1-to-1
Cow bosTau6 ENSBTAG00000027020 COL5A2 1-to-1
Chicken galGal4 ENSGALG00000002509 COL5A2 1-to-1
Chicken galGal3 ENSGALG00000002509 COL5A2 1-to-1
Zebrafish danRer10 ENSDARG00000024847 col5a2b 1-to-2
Zebrafish danRer10 ENSDARG00000031678 COL5A2 (2 of 2) 1-to-2
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2