Special

ENSMUSG00000026043 @ mm10

Biotype
protein_coding
Gene Symbol
Col3a1
Description
collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
Coordinates
chr1:45311538-45349706:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
9664
chr1:45311833-45321496
+
2.34
60.51
0
Intron Retention
407
chr1:45330148-45330554
+
2.48
51.76
0
Intron Retention
153
chr1:45334061-45334213
+
4.05
62.65
0
Intron Retention
284
chr1:45334313-45334596
+
2.58
66.9
0
Intron Retention
110
chr1:45334651-45334760
+
2.51
61.86
0
Intron Retention
320
chr1:45334815-45335134
+
4.01
85.96
0
Intron Retention
562
chr1:45338012-45338573
+
2.34
68.89
0
Intron Retention
82
chr1:45338628-45338709
+
2.58
57.76
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000168542 COL3A1 1-to-1
Human hg19 ENSG00000168542 COL3A1 1-to-1
Rat rn6 ENSRNOG00000003357 Col3a1 1-to-1
Cow bosTau6 ENSBTAG00000021466 COL3A1 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2