Special

ENSMUSG00000029661 @ mm10

Biotype
protein_coding
Gene Symbol
Col1a2
Description
collagen, type I, alpha 2 [Source:MGI Symbol;Acc:MGI:88468]
Coordinates
chr6:4504814-4541544:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
377
chr6:4516015-4516391
+
2.26
57.94
0
Intron Retention
454
chr6:4516446-4516899
+
1.06
50.94
0
Intron Retention
1520
chr6:4516954-4518473
+
2.29
70.89
0
Intron Retention
272
chr6:4518519-4518790
+
1.79
58.1
0
Intron Retention
103
chr6:4518845-4518947
+
1.93
64.65
0
Intron Retention
299
chr6:4518993-4519291
+
2.03
52.2
0
Intron Retention
326
chr6:4520270-4520595
+
2.74
57.1
0
Intron Retention
351
chr6:4520880-4521230
+
2.78
53.77
0
Intron Retention
111
chr6:4521285-4521395
+
1.55
50.02
0
Intron Retention
1152
chr6:4527154-4528305
+
2.25
51.06
0
Intron Retention
1050
chr6:4529122-4530171
+
3.37
70.45
0
Intron Retention
731
chr6:4530226-4530956
+
3.01
60.7
0
Intron Retention
93
chr6:4531011-4531103
+
2.26
55.41
0
Intron Retention
2795
chr6:4512415-4515209
+
3.15
68.63
0
Intron Retention
226
chr6:4515255-4515480
+
2.55
62.24
0
Intron Retention
94
chr6:4515535-4515628
+
2.76
68.72
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000164692 COL1A2 1-to-1
Human hg19 ENSG00000164692 COL1A2 1-to-1
Rat rn6 ENSRNOG00000011292 Col1a2 1-to-2
Rat rn6 ENSRNOG00000052925 NEWGENE_621351 1-to-2
Cow bosTau6 ENSBTAG00000013472 COL1A2 1-to-1
Chicken galGal4 ENSGALG00000009641 COL1A2 1-to-1
Chicken galGal3 ENSGALG00000009641 COL1A2 1-to-1
Zebrafish danRer10 ENSDARG00000020007 col1a2 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2