ENSMUSG00000034684 @ mm10

Biotype

protein_coding

Gene Symbol

Sema3f

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F [Source:MGI Symbol;Acc:MGI:1096347]

Coordinates

chr9:107681500-107710475:-

Assembly

mm10

Other assemblies

mm9

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

Pre-implantation embryo development
Ribosome-engaged transcriptomes of neuronal types
Neural differentiation time course
Muscular differentiation time course
Spermatogenesis cell types
Reprogramming of fibroblasts to iPSCs
Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

MmuALTD0012568-2/3

Alternative 5'ss

27

chr9:107685344-107685370

-

13.06

49.51

0

MmuALTD0012568-3/3

Alternative 5'ss

46

chr9:107685325-107685370

-

86.89

49.51

0

MmuEX0041594

Exon Skipping

93

chr9:107691356-107691448

-

34.13

97.78

0

MmuEX0041595

Exon Skipping

86

chr9:107691130-107691215

-

6.21

48.82

0

MmuINT0141077

Intron Retention

2388

chr9:107689780-107692167

-

27.89

77.24

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Human	hg38	ENSG00000001617	SEMA3F	1-to-1
Human	hg19	ENSG00000001617	SEMA3F	1-to-1
Rat	rn6	ENSRNOG00000017704	Sema3f	1-to-1
Cow	bosTau6	ENSBTAG00000018307	SEMA3F	1-to-1
Chicken	galGal4	ENSGALG00000013370	Sema3F	1-to-1
Chicken	galGal3	ENSGALG00000013370	Q8AXA8_CHICK	1-to-1
Zebrafish	danRer10	ENSDARG00000011163	sema3fa	1-to-2
Zebrafish	danRer10	ENSDARG00000055373	sema3fb	1-to-2