Special

ENSG00000001617 @ hg19

Biotype
protein_coding
Gene Symbol
SEMA3F
Description
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F [Source:HGNC Symbol;Acc:10728]
Coordinates
chr3:50192478-50226508:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
91.75
68.36
0
Alternative 5'ss
279
chr3:50192998-50193276
+
8.25
68.36
0
Exon Skipping
93
chr3:50212529-50212621
+
42.93
66.24
0
Exon Skipping
158
chr3:50223322-50223479
+
96.5
72.53
0
Exon Skipping
115
chr3:50220337-50220451
+
98.96
31.11
0
Intron Retention
1579
chr3:50212622-50214200
+
12.5
54.81
0
Intron Retention
240
chr3:50219837-50220076
+
7.44
50.82
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000034684 Sema3f 1-to-1
Mouse mm9 ENSMUSG00000034684 Sema3f 1-to-1
Rat rn6 ENSRNOG00000017704 Sema3f 1-to-1
Cow bosTau6 ENSBTAG00000018307 SEMA3F 1-to-1
Chicken galGal4 ENSGALG00000013370 Sema3F 1-to-1
Chicken galGal3 ENSGALG00000013370 Q8AXA8_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000011163 sema3fa 1-to-2
Zebrafish danRer10 ENSDARG00000055373 sema3fb 1-to-2