Special

ENSMUSG00000051977 @ mm10

Biotype
protein_coding
Gene Symbol
Prdm9
Description
PR domain containing 9 [Source:MGI Symbol;Acc:MGI:2384854]
Coordinates
chr17:15543079-15564354:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
194
chr17:15553352-15553545
-
95.78
89.96
0
Exon Skipping
28
chr17:15557547-15557574
-
3.71
40.11
0
Exon Skipping
108
chr17:15562415-15562522
-
95.31
88.89
0
Exon Skipping
162
chr17:15563737-15563898
-
2.68
44.66
0
Intron Retention
1448
chr17:15557575-15559022
-
27.94
75.05
0
Intron Retention
1633
chr17:15555668-15557300
-
35.66
73.91
0
Intron Retention
904
chr17:15563332-15564235
-
63.84
88
0
Intron Retention
89
chr17:15557458-15557546
-
17.58
43.32
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000164256 PRDM9 1-to-1
Human hg19 ENSG00000164256 PRDM9 1-to-1
Cow bosTau6 ENSBTAG00000002158 PRDM9 1-to-1