Special

ENSMUSG00000068323 @ mm10

Biotype
protein_coding
Gene Symbol
Slc4a5
Description
solute carrier family 4, sodium bicarbonate cotransporter, member 5 [Source:MGI Symbol;Acc:MGI:2443220]
Coordinates
chr6:83219828-83304945:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
5.92
39.56
0
Alternative 3'ss
27
chr6:83277513-83277539
+
94.08
39.56
0
Exon Skipping
85
chr6:83299426-83299510
+
92.21
70.03
0
Exon Skipping
356
chr6:83301368-83301723
+
1.11
33.65
0
Exon Skipping
960
chr6:83275260-83276219
+
3.86
23.44
0
Exon Skipping
105
chr6:83277014-83277118
+
7.02
21.24
0
Exon Skipping
59
chr6:83277513-83277571
+
98.01
11.74
0
Intron Retention
871
chr6:83272179-83273049
+
14.33
43.7
0
Intron Retention
3087
chr6:83297384-83300470
+
24.78
85.14
0
Intron Retention
4191
chr6:83273322-83277512
+
15.54
35.98
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000188687 SLC4A5 1-to-1
Human hg19 ENSG00000188687 SLC4A5 1-to-1
Rat rn6 ENSRNOG00000010378 Slc4a5 1-to-1
Cow bosTau6 ENSBTAG00000004884 SLC4A5 1-to-1
Chicken galGal4 ENSGALG00000013515 SLC4A5 1-to-1
Chicken galGal3 ENSGALG00000013515 SLC4A5 1-to-1
Zebrafish danRer10 ENSDARG00000002771 SLC4A5 (1 of 2) 1-to-2
Zebrafish danRer10 ENSDARG00000104387 slc4a5 1-to-2
Fruitfly dm6 FBgn0259111 Ndae1 6-to-1