Special

FBgn0003319 @ dm6

Biotype
protein_coding
Gene Symbol
Sb
Description
The gene Stubble is referred to in FlyBase by the symbol DmelSb (CG4316, FBgn0003319). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3R:16116161..16145284. Its molecular function is described by: serine-type endopeptidase activity. It is involved in the biological process described with: cytoskeleton organization; actin filament bundle assembly; proteolysis; wing disc development. 63 alleles are reported. The phenotypes of these alleles manifest in: chaeta; embryonic/larval cuticle; ventral thoracic disc; macrochaeta; adult sense organ. The phenotypic classes of alleles include: increased mortality during development; lethal - all die before end of pupal stage; lethal - all die before end of prepupal stage; lethal. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed during late pupal stages.
Coordinates
chr3R:16116161-16145284:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
48.93
71.56
0
Alternative 5'ss
263
chr3R:16128881-16129143
+
51.07
71.56
0
Exon Skipping
600
chr3R:16140583-16141182
+
97.58
15.38
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000100312 ACR 20-to-10
Human hg38 ENSG00000145244 CORIN 20-to-10
Human hg38 ENSG00000149418 ST14 20-to-10
Human hg38 ENSG00000178226 PRSS36 20-to-10
Human hg38 ENSG00000187045 TMPRSS6 20-to-10
Human hg19 ENSG00000100312 ACR 20-to-10
Human hg19 ENSG00000145244 CORIN 20-to-10
Human hg19 ENSG00000149418 ST14 20-to-10
Human hg19 ENSG00000178226 PRSS36 20-to-10
Human hg19 ENSG00000187045 TMPRSS6 20-to-10
Mouse mm10 ENSMUSG00000031995 St14 20-to-10
Mouse mm10 ENSMUSG00000036480 Prss56 20-to-10
Mouse mm10 ENSMUSG00000044139 Prss53 20-to-10
Mouse mm10 ENSMUSG00000045631 Tmprss12 20-to-10
Mouse mm10 ENSMUSG00000070371 Prss36 20-to-10
Mouse mm9 ENSMUSG00000031995 St14 20-to-10
Mouse mm9 ENSMUSG00000036480 1700027L20Rik 20-to-10
Mouse mm9 ENSMUSG00000044139 Prss53 20-to-10
Mouse mm9 ENSMUSG00000045631 Tmprss12 20-to-10
Mouse mm9 ENSMUSG00000070371 Prss36 20-to-10
Rat rn6 ENSRNOG00000019794 Ovch2 17-to-1
Cow bosTau6 ENSBTAG00000000718 TMPRSS9 20-to-9
Cow bosTau6 ENSBTAG00000010182 ACR 20-to-9
Cow bosTau6 ENSBTAG00000015065 TMPRSS7 20-to-9
Cow bosTau6 ENSBTAG00000037397 PRSS36 20-to-9
Cow bosTau6 ENSBTAG00000037821 20-to-9
Chicken galGal4 ENSGALG00000000458 TMPRSS9 20-to-10
Chicken galGal4 ENSGALG00000012483 TMPRSS6 20-to-10
Chicken galGal3 ENSGALG00000000458 F1NP62_CHICK 20-to-10
Chicken galGal3 ENSGALG00000012483 F1NDU7_CHICK 20-to-10
Zebrafish danRer10 ENSDARG00000053158 prss56 20-to-11
Zebrafish danRer10 ENSDARG00000062758 CR352265.1 20-to-11
Zebrafish danRer10 ENSDARG00000086161 TMPRSS7 20-to-11
Zebrafish danRer10 ENSDARG00000093100 tmprss12 20-to-11
Zebrafish danRer10 ENSDARG00000100088 CU915738.1 20-to-11