Special

FBgn0004656 @ dm6

Biotype
protein_coding
Gene Symbol
fs(1)h
Description
The gene female sterile (1) homeotic is referred to in FlyBase by the symbol Dmelfs(1)h (CG2252, FBgn0004656). It is a protein_coding_gene from Dmel. It has 10 annotated transcripts and 10 polypeptides (5 unique). Gene sequence location is X:8037808..8061436. Its molecular function is unknown. It is involved in the biological process described with: terminal region determination; dendrite morphogenesis; positive regulation of transcription elongation from RNA polymerase II promoter; negative regulation of transcription, DNA-templated. 69 alleles are reported. The phenotypes of these alleles manifest in: dendrite; metathoracic segment; embryonic/larval cuticle; embryonic/larval spiracle; egg. The phenotypic classes of alleles include: phenotype; increased mortality; some die during P-stage; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-12 hour embryonic stages.
Coordinates
chrX:8037808-8061436:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
41.28
100
0
Alternative 3'ss
15
chrX:8053280-8053294
-
58.72
100
0
Alternative 5'ss
0
NA
-
12.25
43.75
0
Alternative 5'ss
112
chrX:8061264-8061375
-
86.19
43.75
0
Alternative 5'ss
0
NA
-
68.34
94.1
0
Alternative 5'ss
15
chrX:8054108-8054122
-
31.66
94.1
0
Alternative 5'ss
0
NA
-
74.11
49.15
0
Alternative 5'ss
12
chrX:8051359-8051370
-
25.89
49.15
0
Alternative 5'ss
14
chrX:8060903-8060916
-
21.96
74.42
0
Alternative 5'ss
40
chrX:8060877-8060916
-
64.31
72.16
0
Intron Retention
1105
chrX:8060159-8061263
-
23.64
63.91
0
Intron Retention
828
chrX:8053295-8054122
-
8.91
78.57
0
Intron Retention
802
chrX:8050557-8051358
-
7.22
31.03
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000169925 BRD3 1-to-2
Human hg38 ENSG00000204256 BRD2 1-to-2
Human hg19 ENSG00000169925 BRD3 1-to-2
Human hg19 ENSG00000204256 BRD2 1-to-2
Mouse mm10 ENSMUSG00000024335 Brd2 1-to-2
Mouse mm10 ENSMUSG00000026918 Brd3 1-to-2
Mouse mm9 ENSMUSG00000024335 Brd2 1-to-2
Mouse mm9 ENSMUSG00000026918 Brd3 1-to-2
Cow bosTau6 ENSBTAG00000010582 BRD3 1-to-2
Cow bosTau6 ENSBTAG00000011074 BRD2 1-to-2
Chicken galGal4 ENSGALG00000000156 BRD2 1-to-2
Chicken galGal4 ENSGALG00000002682 BRD3 1-to-2
Chicken galGal3 ENSGALG00000000156 BRD2 1-to-2
Chicken galGal3 ENSGALG00000002682 BRD3 1-to-2
Zebrafish danRer10 ENSDARG00000006527 brd3a 1-to-4
Zebrafish danRer10 ENSDARG00000022280 brd2a 1-to-4
Zebrafish danRer10 ENSDARG00000046087 brd2b 1-to-4
Zebrafish danRer10 ENSDARG00000100129 brd3b 1-to-4