FBgn0039124 @ dm6
Biotype
protein_coding
Gene Symbol
tbrd-1
Description
The gene testis-specifically expressed bromodomain containing protein-1 is referred to in FlyBase by the symbol Dmel brd-1 (CG13597, FBgn0039124). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 3R:23891597..23893560. Its molecular function is described by: chromatin binding. It is involved in the biological process described with: spermatid differentiation; spermatogenesis; mRNA splicing, via spliceosome. 13 alleles are reported. The phenotypes of these alleles manifest in: intracellular membrane-bounded organelle; intracellular; intracellular organelle; membrane-bounded organelle; organelle. The phenotypic classes of alleles include: male sterile; viable; male fertile; female fertile; flight defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of extremely low expression. Peak expression observed in adult male stages.
Coordinates
chr3R:23891597-23893383:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
| Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
|---|---|---|---|---|
| Human | hg38 | ENSG00000137948 | BRDT | 2-to-1 |
| Human | hg19 | ENSG00000137948 | BRDT | 2-to-1 |
| Mouse | mm10 | ENSMUSG00000029279 | Brdt | 2-to-1 |
| Mouse | mm9 | ENSMUSG00000029279 | Brdt | 2-to-1 |
| Rat | rn6 | ENSRNOG00000006770 | Brd4 | 1-to-1 |
| Cow | bosTau6 | ENSBTAG00000047443 | BRDT | 2-to-1 |
| Chicken | galGal4 | ENSGALG00000006031 | BRDT | 2-to-1 |
| Chicken | galGal3 | ENSGALG00000006031 | BRDT | 2-to-1 |
| Zebrafish | danRer10 | ENSDARG00000102802 | brdt | 2-to-1 |