Special

ENSG00000137948 @ hg38

Biotype
protein_coding
Gene Symbol
BRDT
Description
bromodomain testis associated [Source:HGNC Symbol;Acc:HGNC:1105]
Coordinates
chr1:91949371-92014426:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
28.11
37.82
0
Alternative 3'ss
10
chr1:91949890-91949899
+
71.89
37.82
0
Alternative 5'ss
0
NA
+
89.24
63.04
0
Alternative 5'ss
31
chr1:91949489-91949519
+
10.76
63.04
0
Exon Skipping
69
chr1:91949890-91949958
+
33.63
58.35
0
Exon Skipping
45
chr1:91949638-91949682
+
78.29
65.59
0
Exon Skipping
229
chr1:91962718-91962946
+
90.68
33.18
0
Exon Skipping
138
chr1:91964627-91964764
+
85.32
39.98
0
Exon Skipping
96
chr1:91950716-91950811
+
3.87
14.68
0
Exon Skipping
367
chr1:91950108-91950474
+
40.61
38.35
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000029279 Brdt 1-to-1
Mouse mm9 ENSMUSG00000029279 Brdt 1-to-1
Rat rn6 ENSRNOG00000002073 Brdt 1-to-1
Cow bosTau6 ENSBTAG00000047443 BRDT 1-to-1
Chicken galGal4 ENSGALG00000006031 BRDT 1-to-1
Chicken galGal3 ENSGALG00000006031 BRDT 1-to-1
Zebrafish danRer10 ENSDARG00000102802 brdt 1-to-1
Fruitfly dm6 FBgn0034423 CG7229 1-to-2
Fruitfly dm6 FBgn0039124 tbrd-1 1-to-2