Special

ENSMUSG00000029279 @ mm9

Biotype
protein_coding
Gene Symbol
Brdt
Description
bromodomain, testis-specific [Source:MGI Symbol;Acc:MGI:1891374]
Coordinates
chr5:107760178-107816077:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
33.82
28.57
0
Alternative 3'ss
3
chr5:107799174-107799176
+
66.18
28.57
0
Alternative 3'ss
0
NA
+
85.9
29.58
0
Alternative 3'ss
15
chr5:107805269-107805283
+
14.1
29.58
0
Alternative 5'ss
0
NA
+
79.29
45.9
0
Alternative 5'ss
55
chr5:107760327-107760381
+
17.22
43.44
0
Exon Skipping
206
chr5:107806029-107806234
+
84.59
81.08
0
Intron Retention
183
chr5:107788029-107788211
+
16.28
91.38
0
Intron Retention
66
chr5:107788725-107788790
+
34.51
91.74
0
Intron Retention
5935
chr5:107799349-107805283
+
12.98
32.82
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000137948 BRDT 1-to-1
Human hg19 ENSG00000137948 BRDT 1-to-1
Rat rn6 ENSRNOG00000002073 Brdt 1-to-1
Cow bosTau6 ENSBTAG00000047443 BRDT 1-to-1
Chicken galGal4 ENSGALG00000006031 BRDT 1-to-1
Chicken galGal3 ENSGALG00000006031 BRDT 1-to-1
Zebrafish danRer10 ENSDARG00000102802 brdt 1-to-1
Fruitfly dm6 FBgn0034423 CG7229 1-to-2
Fruitfly dm6 FBgn0039124 tbrd-1 1-to-2