FBgn0260970 @ dm6
Biotype
protein_coding
Gene Symbol
CG42593
Description
The gene Ubr3 ubiquitin ligase is referred to in FlyBase by the symbol DmelUbr3 (CG42593, FBgn0260970). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (3 unique). Gene sequence location is X:7935896..7953883. Its molecular function is described by: ubiquitin protein ligase activity; protein binding; zinc ion binding. It is involved in the biological process described with 6 unique terms, many of which group under: regulation of cellular process; positive regulation of biological process; regulation of cell death; cellular protein modification process; cell death. 26 alleles are reported. The phenotypes of these alleles manifest in: visual system; eye-antennal disc; cell; antennal segment; sensillum. The phenotypic classes of alleles include: lethal - all die before end of pupal stage; phenotype; lethal - all die before end of prepupal stage; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-06 hour embryonic stages.
Coordinates
chrX:7935896-7953883:+
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000144357 | UBR3 | 1-to-1 |
Human | hg19 | ENSG00000144357 | UBR3 | 1-to-1 |
Mouse | mm10 | ENSMUSG00000044308 | Ubr3 | 1-to-1 |
Mouse | mm9 | ENSMUSG00000044308 | Ubr3 | 1-to-1 |
Rat | rn6 | ENSRNOG00000008616 | Ubr3 | 1-to-1 |
Cow | bosTau6 | ENSBTAG00000020296 | UBR3 | 1-to-1 |
Chicken | galGal4 | ENSGALG00000009608 | UBR3 | 1-to-3 |
Chicken | galGal3 | ENSGALG00000009608 | 1-to-3 | |
Zebrafish | danRer10 | ENSDARG00000042508 | ubr3 | 1-to-1 |